Flux Proteomics is an integrated data management system for proteomics experiments. Data from experiments as two-dimensional gel, liquid chromatography and mass spectrometry are managed by the system. FluxProteomics establishes a causal relationship between experiments, allowing the researcher to identify which experiments are related to which other, simplifying the process of controling experimentation and identifying experimental errors. FluxProteomics also allows the direct connection with existing databases on the Internet to make the identification of samples automatically whenever possible.